merge develop -Dnone -Ibreaking -Eexclude -Ssuccess-only

Repository: openmicroscopy/openmicroscopy
Excluded PRs:
  # PR 2895 dominikl 'Reload groups after users added/removed' (user: dominikl)
  # PR 3074 sbesson 'Fix OMERO.cpp integration tests' (user: sbesson)
  # PR 3063 dpwrussell 'Jquery update migration (Part 2 of 4)' (user: dpwrussell)
  # PR 2363 dominikl 'Java Gateway API' (label: exclude)
  # PR 3077 will-moore 'channel double label' (user: will-moore)
  # PR 2985 will-moore 'Download preserves directories of original files' (user: will-moore)
  # PR 3042 will-moore 'Download dataset project' (user: will-moore)
  # PR 2182 joshmoore 'Read only flag' (user: joshmoore)
  # PR 3086 will-moore 'Create image by tiling 12459' (user: will-moore)
  # PR 3087 bpindelski 'PermissionsTestAll: refactor code.' (user: bpindelski)
  # PR 3080 sbesson 'Add error message when importing with OMERO.py' (user: sbesson)
  # PR 3057 will-moore 'Rating web' (user: will-moore)
  # PR 3065 sbesson 'Split UpgradeCheck unit and integration tests' (user: sbesson)
  # PR 3069 aleksandra-tarkowska 'Scalebar' (user: aleksandra-tarkowska)
  # PR 3071 ximenesuk 'Move external files to omero_ext' (exclude comment)
  # PR 3000 jballanc 'Update artifacts for Lucene, Hibernate, and Spring' (user: jballanc)
  # PR 2585 aleksandra-tarkowska 'making time_zone and first_day_of_week configurable' (exclude comment)
  # PR 3081 jburel 'Filter by name' (user: jburel)
  # PR 3029 rleigh-dundee 'OmeroCpp: Disable RMap and search tests' (user: rleigh-dundee)
  # PR 3073 mtbc 'upgrade the character encoding of passwords (rebased from dev_5_0)' (user: mtbc)
  # PR 3084 dominikl 'ROI/measurement tool fixes' (user: dominikl)
  # PR 3091 ximenesuk 'Flake8 the omero gateway' (exclude comment)
  # PR 3089 aleksandra-tarkowska 'updating rewrite rules configurator' (user: aleksandra-tarkowska)
  # PR 3090 manics 'Use FORCE_SCRIPT_NAME and STATIC_URL in `web iis`' (user: manics)
  # PR 3078 bpindelski 'LDAP: Improve username case sensitivity support (assist #4821).' (user: bpindelski)
  # PR 3088 jburel 'Channel as int' (user: jburel)
  # PR 2979 will-moore 'Thumbnail cache busting' (user: will-moore)
  # PR 3037 joshmoore 'Group sudo' (user: joshmoore)
  # PR 3058 sbesson 'Homebrew nginx (rebased onto develop)' (user: sbesson)
  # PR 3085 sbesson 'OmeroPy: src flake8 (III)' (user: sbesson)
Already up-to-date.

Repository: openmicroscopy/bioformats
Excluded PRs:
  # PR 1296 melissalinkert 'Add test for getRequiredDirectories' (user: melissalinkert)
  # PR 1265 qidane 'New units' (status: failure)
  # PR 1249 PremyslFiala 'ND2 - Bug fixes' (user: PremyslFiala)
  # PR 858 melissalinkert 'Initial support for Veeco AFM data' (user: melissalinkert)
  # PR 1015 qidane 'Messy binary' (exclude comment)
  # PR 816 melissalinkert 'Add support for multi-channel Volocity Clipping datasets' (user: melissalinkert)
  # PR 1309 melissalinkert 'Allow tile-based access of large JPEG-2000 images' (exclude comment)
  # PR 1161 sommerc 'Initial CellH5 Reader class' (user: sommerc)
  # PR 857 melissalinkert 'Initial support for Zeiss .lms files' (user: melissalinkert)
  # PR 1177 rleigh-dundee 'specification: Add metadata for HDF5 embedding' (exclude comment)
Updating 613124f..04a09b0
Previously merged:
  # PR 1154 melissalinkert 'Leica: prevent exception when linking EmissionFilter'

Merged PRs:
  # PR 1362 melissalinkert 'Make FormatReader's RandomAccessInputStream transient'

Repository: ome/scripts
Already up-to-date.

Repository: openmicroscopy/ome-documentation
Excluded PRs:
  # PR 990 kennethgillen 'for users who have compiled isapi_wsgi on x64' (user: kennethgillen)
Updating 89e8fa5..99e3a32
Previously merged:
  # PR 1005 hflynn 'Adding UTF-8 password limitation for Windows (rebased onto develop)'

Generated by OME-5.1-breaking-push#109 (http://ci.openmicroscopy.org/job/OME-5.1-breaking-push/109/)