initial commit
Qua 18 Mai 2011 20:41:59 BRT
Qua 18 Mai 2011 20:42:57 BRT
First attempt of implementing myop-predict.pl
indexing the fasta file
fixing deadlock when the pipeline buffer is full
small bugs
each ghmm model has a different tops_to_gtf implementation
tops_to_gtf.pl is specific to a ghmm architecture
fixing another bug
a good implementation
myop-gtf_to_cds.pl
fixing specific training and adding myop-gtf_to_cds.pl
myop-predict.pl
myop-predict.pl
fixing a bug related with Bio::DB::Fasta, it is fork-safe
iteractive training
new myop predict
logging the step number that was processed
reducing maximum length