fix typo
test mode
conf change
updated template / submission
renamed script
fix mysql query
various bug fixes
added psql cert to loaddb script
cleanup of psql cert
fix file handle bug
Merge pull request #273 from teharrison/master

fix file handle bug
Merge pull request #4 from teharrison/master

master to develop
fix broken variable
Merge branch 'develop' of git@github.com:teharrison/pipeline into develop
syntax fix
fix sort logic, more error handeling
Merge pull request #5 from teharrison/master

Merge pull request #273 from teharrison/master
Merge branch 'develop' of git://github.com/MG-RAST/pipeline into develop
Merge branch 'develop' of git@github.com:teharrison/pipeline into develop
Merge pull request #276 from teharrison/develop

bug fixes and updates