random forest and single-node driver script changes
Changes for LGN segmentation and cleanup (Random Forest version).
Deep net support added, failover / retry added to main .py files, keep-running function added to driver.py (run with -k). Full pipeline now runs without restarts on Odyssey!
Add skip-1 to window fusion
Added extract_overlay_plane. Changed log error messages on repeated failures.
Overlay boundary color update.
Merge remote-tracking branch 'origin/lgn' into lgn
Add skip-N code
2-segment block bug fix.
Merge remote-tracking branch 'origin/lgn' into lgn
keep normalized matrices as sparse
pairwise_multimatch added
seed change to match output_overlay
deep neet (theano) classifier added
qsub probs only driver added (for trestles / gordon)
matchn_slices parameter added to control pairwise volume.
driver_qsub_probs_only.py fixed
bug fixes
qsub fixes
tested ok.