New gmt analsysi module of Genome::Model::Tools::Analysis::Coverage::MergeReadcounts added
Merge branch 'master' of ssh://git/srv/git/genome
use curl since it support file:// URLs
use curl since it support file:// URLs
use curl since it support file:// URLs
updated expected output due to new processing profiles and env

Here are the pairs of changes that were made:

Oct 2012 Default Somatic Variation WGS
Oct 2012 Default Somatic Variation WGS -- DV2 filter params bug fix

Oct 2012 Default Somatic Variation Exome
Oct 2012 Default Somatic Variation Exome -- DV2 filter params bug fix

Oct 2012 Default Somatic Variation WGS (2762562)
Oct 2012 Default Somatic Variation WGS -- DV2 filter params bug fix (b359413673b040d2b29b7810e71c4882)

Oct 2012 Default Somatic Variation Exome (2762563)
Oct 2012 Default Somatic Variation Exome -- DV2 filter params bug fix (ccdea755cabe46fb826394f6ba388ccc)

https://gscweb.gsc.wustl.edu
file://
disable test for one week b/c of disk maintenance
updated expected output for new GENOME_TEST_INPUTS

Changed from/to:

https://gscweb.gsc.wustl.edu
file://