Malcolm Cook pointed out that demo doesn't run currently.  This was due to ExptDate column being added to fit.txt files (bug1) and addition of bootstrapping option for epistasis analysis (bug2).  Both fixed.

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@571 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Bump version number

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@572 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Upgrade instructions pointed to wrong step number for Linux and Windows.

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@573 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Tidying up curve fitting functions

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@574 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@575 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Using fread from data.tables (faster version of read.delim)

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@576 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
New version of package for OSX

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@577 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Update OSX

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@578 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Strip negative time values before fitting curves...

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@579 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Removing duplicate generation of Gene column from qfa.fit

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@580 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Removed deprecated, commented code showing GIS calculations with scaled fitnesses

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@581 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
generalising convergence check

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@582 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Adding ORF names to "post-processing" output.  Systematic names are much less ambiguous and more stable than standard gene names.

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@583 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Added coda dependency...

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@584 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Adding effective size to summary plots...

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/qfa@585 edb9625f-4e0d-4859-8d74-9fd3b1da38cb