Initially add PconsC part
Initially add folding part.
Update README
update folding stepw
Add parallel predictALL script template. TODO: make it run in parallel.
Update constraint reformatting to new Rosetta version.
Add license to release branch.
Add a3m to jones parser.
Rename a3m to jones parser.
Add a3m to trimmed (plmDCA input) parser.
PconsC not using fasta files anymore. Switched to a3m instead.
Fixed rosetta score parser.
Update extract and folding part to new rosetta version.
Update reformat.pl to latest version.
Improved error handling for dependencies.
Improved error handling.
Update Rosetta input preparation.
Update Rosetta input preparation.
Folding part tested.
add plmDCA matlab version