Modified to return p_old_given_data and p_new_given_data in addition to odds_ratio
Modified PM_task so that it will generate multiple lures per trial
Modified EM_trial_simulator to agree with previous changes to make simulation follows Jarrod's task where we present multiple lures per trial
Making minor changes to synchronize specification of parameters at PM_task level down to EM_trial_simulator and REM.m
Naming changes
Added context shift across trials, default behavior of never replacing memory traces for the same item in EM, and some minor cleaning up
Added WM system.  Fixed a minor error with the geornd that was giving us 0 in our results.
Minor change to fix number of presentations per trial - in order to reduce variability when checking work
Added noisy encoding to WM process and fixed things so we actually save the context vectors from each trial
Added several plots of results
Fixed problem where PM_task wasn't actually using the numUniqueItems parameter
An extra plot
Fixed WM match strength bug
Giant commit: 1. made some changes to make it easier to test things locally and deploy onto the cluster without having to rewrite any of the scripts. 2. Added code to see the effect of individual components of the model on the WM dynamics
Fixed minor EM_trial_launcher bug. Switched definition of WM rehearsal success to include correct memory and correct context. IMPORTANT BUG: fixed issue where Trial_Simulator saving pastLureStrengths from previous trials, only kept record of those added in that trial. Added description of results prompt to aggregate_simulation_results_from_cluster, saving both in local directory and remote (fastscratch) directory.  Added presentationTargetIndicator to results being aggregated.
Changed structure of aggregating simulation results so that we have two scripts now. 1) aggregate simulations results and return them separately and also a collapsed (averaged) version. 2) a version that only returns the collapsed version. Also, improved naming of aggregate results
Made it so that WM encoding is an exact replica of trace produced by EM encoding.
Added robustness to unreadable .MAT files, which sometimes happens due to the cluster being an asshole, in aggregate_sim_results_from_cluster.m script.
Trying supposedly faster ROC analysis function from matlab file exchange
Modified plot rehearsal failures to remove smoothing