Fix CompactRange to apply filter to every key

Summary:
When doing CompactRange(), we should first flush the memtable and then calculate max_level_with_files. Also, we want to compact all the levels that have files, including level `max_level_with_files`.

This patch fixed the unit test.

Test Plan: Added a failing unit test and a fix, so it's not failing anymore.

Reviewers: dhruba, haobo, sdong

Reviewed By: haobo

CC: leveldb, xjin

Differential Revision: https://reviews.facebook.net/D14421