Moved all files into repo


Former-commit-id: f8c940e1dac7033e9bde600296e34d4102eb6593
Updated readme with avatar/logo


Former-commit-id: 7b9e2e165de1e59920c53cebe1f54107f2fbc8b4
data uri inline


Former-commit-id: 4dbb6e1af197a8b4e5ff96c013729755be863007
Gave up data uri


Former-commit-id: ad9273c39cd862d20af6c31be038bc7f31f357f5
Updated readme


Former-commit-id: d5ad99eac1526e4024c682fbff141f5efda8f4f7
Some basic structure rework

CoverageAdaptor will generate BEDGraph intervals, Chanjo takes care of
actual coverage calculations.


Former-commit-id: 2e1b2fdaef225cc8e9f88b28a9ffdd8d6a5e6a3d
Updated README


Former-commit-id: 542036c05d07b7055e36091256659d311de5a59f
Update README.md

Former-commit-id: 7d1469abd5bfd32749a4276fa8a317e59b280cf6
Tests for bam coverage adaptor


Former-commit-id: c9623424d381198edecf1ec9f152636475da01bd
Chanjo tests for coverage


Former-commit-id: 61853c574d3be691cfdfb6c2823be0b3e0577ad7
Update README.md

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Update README.md

Former-commit-id: 6d00135dfec57dc8ee3b86a40c86e4068ff39e9a
BAM callback test, chanjo and bam handles intervals

SQL exons don't load automatically and are sorted by start


Former-commit-id: 83d3c160ad8371dd3a397d0a9677932969330aff
Corrected bug in bam adaptor, added bam tests


Former-commit-id: 16170f20d5fdebd28caaeaffac42ecc7017ee269
Start 0-based, end 1-based


Former-commit-id: 6d0bb8ed84faceb14cd3844f34535d2dd00f45cf
Corrected test and cleaned up chanjo coverage method


Former-commit-id: 463884bc277e4de02a2bad650e18b3bc499931c6
Unified interval definition, more tests, coverage levels


Former-commit-id: 8ff461fd1ff5fbe7307c483297cfa01a3979c211
Create LICENSE

Former-commit-id: 0ffc048410867e500838605a77ff7b0bf1cb26a7
Improved readability of format methods


Former-commit-id: 979b2ac1e1e8563f68641ee6b62f6940d534226f
Modified chanjo to work multithreaded


Former-commit-id: c066c5ed2a8a5a924abf0bd07cfb6bee90b05bab