removed fluff about "the next generation of phylogenetic informatics data"
clarified meaning of "semantic annotations"
added the use case of interacting with NeXML-based web services
added another thing to add to the intro
changed in an attempt to draw the distinction between community conventions for flat text, and standards that have been described in technical recommendations under the auspices of the W3C (i.e. "web standards")
typo fix
typo fix
typo fix
typo fix
prefer to use "document" instead of "file", as NeXML data can be obtained from a handle that reads from a remote location, i.e. the data never reside as a file in the system
although this is denormalized into just trees, data and metadata, NeXML documents have four components, not three.
typo fix, re-flow of paragraph
completed sentence, re-flowed paragraph
s/file/document/
added clarification about multiple blocks
typo fix
corrected capitalization
corrected capitalization
s/file/document/
recorded my doubts about having aliased method names