removed dead code
added option to output multifasta or single fasta seqs when supplying a BSML input
added parameter for multifasta output option
edited bsml2fasta configs to be multifasta output instead of single-fasta
changed naming format of files from _filter_bogus_genes to _filtered
changed format of an if- clause
updated bsml2fasta to allow for the splitting of multifasta output by a certain number of sequences per file
fixed bsml list naming error
changed lipop2bsml to handle multifasta output
passthrough option for ncbi-blastp ncbi-blastx and hmmpfam3
fixed BSML Analysis writing bug
Changed memory requirements from 10G to 15G mem_free
changed script to allow for multiple polypeptide filtered btab hits to be used to create ber nuc dbs
adding multifasta option to create_prok_pipeline.pl
added a comment
removing bsml2fasta OUTPUT_FILE config parameter value for single output configs
modified to filter hits per polypeptide instead of per file
storing IDs to list file rather than passing IDs directly to fetch_fasta_from_db.pl
fixed bug to allow total e-value of a hit to be shown
changed changelog