Update 8.7.2013-p3

Added Analytic wedge studies
Update 8.30.2013:1040

Changed studies folder name to analytic_wedge
Updated study to be included in CMakeLists.txt
Corrected small error in reflection_test.cc
Added matlab code for analytic_wedge, demo, and gcd calc
Removed Files
Update 9.5.2013:1001

proploss.cc:  With large enough target sets, it became necessary to change the variables in the
			  ncfile to longs instead of shorts.
Update 9.9.2013:1216

reflect_loss_rayleigh.cc/.h		Altered reflection equation to by factoring out a Zb*Zw
								from the numerator and denominator. By doing so we remove chances
								of dividing by zero. In order to make this same information valid
								for shear instances, it required the introduction of a new variable
								(bool) which determines how to calculate the impendence. This also
								required the treating the new Zb in a special way.
Update 10.1.2013 1536

CMakeLists.txt:			Added Pekeris Waveguide study
studies/pekeris:		Pekeris Waveguide study
attentuation_test.cc:	FE_INVALID test within Rayleigh Reflections
studies/analytic_wedge:	Modified test to simulate ASA wedge
proploss_test.cc:		Added Munk/Surface duct proploss tests to verify TL production
trapfe.cc:				Removed FE_INVALID from feenableexcept, all tests run
Update 11.5.2013 1058

Merged in Development0.04 to bring this branch up-to-date.
Merge branch 'development0.04' of https://github.com/campreilly/UnderSeaModelingLibrary into analytic_wedge
Update 1.8.2014 1155

Moved to analytic_wedge branch and merged all changes from development0.04 to update and begin work on this branch.
Had errors in the CMake file and would not generate properly. Corrected the errors and now makes.
Update 1.8.2014 1336

Updated branch with newest features from development0.04 and reran all tests. All tests are passing. This finalizes the current merge state.
Merged updated changes from Development0.04
Added comments to shear bool for doxygen
Merge branch 'master' of https://github.com/campreilly/UnderSeaModelingLibrary into analytic_wedge
Update 1.9.2014 1022

Changed format of test display for bottom_type_effects.
There was an error introduced within the code of wave_queue.cc when merging, rectified and verified correctness with regression tests.
Updated files for WIN32 support.
Modified to study deanes analytic solution.
Fix normalization error in theory paper.
Add two new equations to show where this normalization comes from.
Add David Thibaudeau as an author in anticipation of his excellent wedge work.
Closes Issue #46
Upated 2.10.2014. Added Rayleigh Grid. Standardized Reflection Loss
terms for Netcdf and Rayleigh.
Merge branch 'development0.05' of https://github.com/campreilly/UnderSeaModelingLibrary.git into development0.05