release candidate 2
Merge branch 'master' of github.com:clark-lab/ngsane
support htseqcount on cuffmerge gtf in pipeline
Merge branch 'master' of github.com:clark-lab/ngsane
Bugfix
Merge branch 'master' of github.com:clark-lab/ngsane
Compatibility with samtools v1.x improved
support folders to be skipped
Hicup updated to v 0.5.0
Merge remote-tracking branch 'BauerLab/master'
Update to hicup version 0.5.0