Directory structure now conforms to the Pathogen Informatics standard
Removed VRTrack codebase. Commented out several use statements. Added Debug module to use for debugging
Debug method is printing the process tree to screen for the files in this commit. Will need to delete this, but useful for now.
Removed all the redundant modules form the VertRes package
Update README.md
Clean up the debug statements on the main RNASeq modules
Cleaned up the last debug statements
Some files needed to be added back to the project for the code to work
Removed test data irrelevant to the RNASeq analysis
Merge pull request #3 from js21/master

Only necessary modules in repo.