added varscan
added gem
added gsnap
added mrsfast
added mrfast
update full_no_gatk
update full_no_gatk
update full_no_gatk
full_no_gatk.sh
update full_no_gatk
update full_no_gatk
update full_no_gatk
dev graveyard
full_bo_gatk only
release-0.9
Merge branch 'release-0.9'
release-0.9