initial commit
Example barcodeFile added
Script can now split reads by barcode and output to fastq
Renamed script and added some more documentation.
Some minor script improvements.
Initial commit plotHSMetric
Added plots for insert size, quality by cycle and quality score distribution for each sample processed.
Renamed tool
Added runName to the names of output files
Changed some comments.
Added HSMetric summary table to html output
Removed a testing variable
Figures are now named based on the runName.
Old css file name
Moved plotIlluminaMetrics to new repo
new trioConcordance script
New way of parsing arguments
Added .gz support for VCF files.
bitbucket to github