fix: update for use in workflow and reflect new nipype conventions
fix: TOPUP naming and flexibility on extension overloading based on name
fix: more topup naming fixes
Merge branch 'master' into fix/eddy

* master:
  fix: moving save from numpy to pickle
  install ordereddict for py26
  fix: moving save from numpy to pickle
  install ordereddict for py26
  fix: update conda in environment
  fix: parenthesis fixes
  dbg: anaconda to miniconda update
  dbg: conda update
  fix: update conda
  ENH: Large SGE jobs were overloading on qstat
tst: updated tests
fix: updated apply topup
fix: arg generation
fix: topup workflow
tst: dummy files
fix resolved conflict
Merge pull request #794 from satra/fix/eddy

MRG: TOPUP update