Removed Gene column from data as this is difficult data to get with the newer pipelines
Added subroutine to process VCF files instead of tabular files
Fixed misreporting of NOCALL variants.  Fixed missing output with bad query.  Added new NOCALL opt and fixed Getopts::Long to handle complex opts
v3.7.0_062314: Fixed incorrect NOCALL reporting and missing variants.  Added new NOCALL filtering option
Using new NOCALL opt in vcfExtractor
Fixed NOCALL / NOREF misreporting bug
Fixed position checking to include X/Y chromosome lookups
Fixed position checking to include X/Y chromosome lookups