API creation started. Creating object oriented versions of last commit
and creating an API using header files.
readme update
Successfully created cmdline_parser object. Beginning transition to the
object oriented version of the code. Added stdin.h to be included in all
files which will include namespace and stdio and other generic things
that only need to be included once.
completed destructor for cmdline_parser class. 
trying to make stdinc.h show up in the online repository
attempt in adding stdinc.h to repository online.
trying to add stdinc.h to github

again
added findKmerInclude to hold all configuration macros and library
stabilizing github
Added more API functionality, but have not started the transition yet.
Major changes. Making findKmer a class that can encapsulate all other
classes. Created a main.cpp which is an example of what the user can do
with the code, it will have no real computation in it eventually, only a
#include findKmer.h and will create a new findKmer class and access the
methods through that... This could lead to a way to parallelize easily.
Merge branch 'master' into API_Creation