Wiles Project 1

This is a lot shorter than I had originally planned. I wanted to do a huge project analyzing some data from my lab, but could not for the life of me figure out how to use phyloseq and struggled finding other ways to analyze microbial data sans external packages. I decided to test the reproducibility of phyloseq tutorial. Hope this is ok! 

On this note, can we talk more about what to do with microbial sequence data in class?