EX-126(kmeng): Initial commit to this branch.
Adding benchmark files.
EX-126(kmeng): Finished adding functional tests.
EX-126(kmeng): More fixes, ready to merge to develop.
Merge remote-tracking branch 'origin/develop' into
ex-126_add_functional_tests

Conflicts:
	jacquard/jacquard.py
	test/filter_hc_somatic_test.py
EX-126(kmeng): Fixed one more test to make travis happy.
EX-126(kmeng): Merge into develop
EX-126(kmeng): Changed name of benchmark file folders so that they can
be committed.