#338 Removed browser compatibility popup.
#341 Changed stagedata urls, since they apparently no longer function for ontology API calls.
#340 Implemented ontology overview doduble node circles, with the inner one representing the number of terms mapped to the central node.
#340 Have circle stroke width and inner radius representing unmapped and mapped term counts, respectively. Renders much faster than when using two circles as in previous commit.
#344 Moved tool tip a bit, for all nodes, so that the bottom right nodes don't get covered. It's not optimal, but tipsy doesn't support passing functions to the offset property.
#335 Removed old percentage sliders, added one to cut out nodes on the basis of their mappign counts, in order from small to large. More work to be done when merging with Elena's layout improvements.
#340 Revised back to two circle implementation of double bubble effect. I am not satisfied with the circle sizes. Also added a hard cap to the number of ontologies rendered, but this needs some more work. Tipsy tool tips work fine with second circle now, thanks to an SVG property I found out about.
#340 Revised inner circle area, back to my first approach, of letting the normal scaler apply (except for some edge cases). I'm surprised I even moved away from that approach. I also added some edges around both the inner and outer circles to enhance visibility. They don't seem to make the graph overly busy either. I believe I am done with this case.
#335 When adding in the double circles, missed hiding and showing the inner circles when the slider is changed.
#335 Fixed up some issues with acronyms, have invalid ontologies removed now. I have an issue about when to call the on demand fetching for soft filtered nodes. If I do not call it as they are added, the layout swirls all over the place. Try commenting line 389 to see this occur, and see how the fetch calls are still made elsewhere. Odd.
Naughty arg in launch file.
Merge from appengine fix branch successful
Needed datanucleus to avoid compilation errors after all. Eclipse does not perform proper clean and build when asked to :(
Moved app engine lib needed for Eclipse web launch into repo, so that we don't need different paths for different users in the launch file.
Merge branch 'master' into issue330_d3layout