BUG: split include directories into appropriate cmake variables HDF5

ITKHDF5_SYSTEM_INCLUDE_DIRS does not get modified after installation, so with
system version of HDF5, the corresponding Modules.cmake still contains some
reference to the binary tree which may not exist anymore.

Change-Id: Ia62c614485f55f857365f99843ea8dda6650a9bb
BUG: Fixing incorrect MINC style inverse transform

Change-Id: Id3ccb0a9c37d86bbb8ff53c33c64f47256a9c3d8
BUG: missing gdcm libraries when using system GDCM

Change-Id: Icdb8e3adc6acd316091235b7d3489887afafa1c1
Merge branch 'SystemHDF5_release' into release

Change-Id: Ic582e4567fa58ff3a0c4d03422999dcb7536ae1f
Merge branch 'SystemGDCM_release' into release

Change-Id: Ia742591eb1130a7d1922ba454081dac62624180f
Merge branch 'MINC_FIX_INVERSE_TRANSFORM_release' into release

Change-Id: Iac55c5cc0b993680d2d333149f8e2ce3b47f4b52