flasher_start_color_seq: fix for setting string pvs
HPS_EPICS.adl: added link for Flasher.adl
apps/.gitignore: updated for new wave2rootApp
harp_genericApp: added motor channel for hps target (per stepanya, levon)
flasherApp: updated order of operations in scripts
flasherApp: added script for setting all LEDs off or on
flasherApp: added flasher_stop_all.sh for stopping all sequences
TODO: added flasherApp cleanup
flasherApp: fixed a handful of scripts for start/stop sequences
harp_genericApp: finalized hps_target motor
bomApp: moved from iocclassc4 to iocclassc1
scalerApp: fixes for scaler_hps.adl