Adding a Dockefile flexible enough to run externally on Travis and Internally.
Adding continuous_deployment subfolder with CID hooks

Adding customized fabfile for managed deployment in CID environment

Ignoring .python-version

Commenting out apt-get install rubygems

Ignore .project_config.json

Get etcd app configuration settings when starting the container

Update APP name in bootstrap.sql

Install rubygems from tar package

Adding LDAP as an option in settings

Updating app.py with new HAY_STACK settings

Removing logging from settings.py

Adding wsgi.py from ATI template

Removing LDAP settings from settins.py

install rubygems-update

Upgrade whoosh and avocado

Making run test script executionable
Adding chopauth

Adding chopauth

Adding chopauth settings after other imports

Adding chopauth installation to CID framework requirements.txt file

Adding in chop auth settings into urls.py

Adding urls.py from ATI template
Use linked memcache in deploy
Start PEDSnet development

This commit breaks from previous development, which was toward a
demo-able app built on the OSIM2 simulated dataset. The new development
path is towards a production-capable app built on the OMOP CDMV4 data
model for the PEDSnet Data Coordinating Center. In that spirit, this
commit removes all migrations and starts over with new models, beginning
with person, provider, care_site, organization, location, visit,
condition, procedure, and drug. These models are intended to sit on top
of materialized views, the code for which is in the PEDSnet DCC repo.

This commit also updates the project dependencies, including cilantro,
and makes changes to the settings to accomodate the django-haystack
upgrade. The base.html template is modified to include the bootstrap css
files as cilantro is no longer packaged with them.

The main.js project bootstrap file is modified to customize the type of
two fields (person_id and provider_id) as strings, in order to convince
cilantro to use pick-list controls for those fields. The avocado
datafields and dataconcepts are configured and stored in a fixture with
paired metadata migration.

Fixes #4

Signed-off-by: Aaron Browne <aaron0browne@gmail.com>
Merge branch 'integration_test' of https://github.com/cbmi/omop_harvest into integration_test