Fix embedded hasMany not becoming dirty after save

Steps to reproduce:
1. Modify an item of an embedded hasMany array
2. Save the array (or the individual item)
3. Modify the item back to its original state

The item is clean when it should be dirty
Merge pull request #322 from dwickern/embedded-hasmany-dirty

Fix re-dirtying embedded hasMany after save
Merge pull request #337 from ckung/master

Register application store if exists. Fix tests to use App.destroy.
Rename dataAdapter to data-adapter
Merge pull request #342 from teddyzeenny/data-adapter

Rename dataAdapter to data-adapter
Change path of jquery again
Fix container not being set on materializRecord in embeddedHasManyArray for deeper relationships