Integrated util.vcfParser.VCFParser by swapping out util.VCFLineParser.
Deprecated util.VCFLineParser by renaming to util.VCFLineParser_OLD.
Debugging Variant Pool.
Testing VCFParser.
Deprecate VCFLineParser.
Debug strip initial matching bases in VCFParser.
Merge branch 'vcfparser' with the 'master' branch now that VCFParser has been tested.
Merge branch 'master' of https://github.com/ARUP-NGS/Pipeline