ENH: added function to group samples by metadata categories
TST: fixed bug
TST: modified expected result type to be more useful
TST, ENH: cleaned up code, tests pass, fixes #1678
MAINT: removed unnecessary code
ENH: updated interface to include additionally useful information
DOC: added function documentation
MAINT: fixed error in last commit
TST: expanded tests
ENH: added script for replicate sample collapsing
ENH: added (currently untested) function separating out sample metadata collapsing
DOC: added usage example
TST: added test files
ENH: extremely ugly first step at collapsing mapping file
Merge branch 'issue-1716' into issue-1678-script
Made modifications to scripts, merged library functions into single workflow file per discussion with Greg C. Should cover automation of commands for multiple input fastq files for join_paired_ends.py, extract_barcodes.py, and split_libraries_fastq.py. Putting all of these under #1715 as they are related code/functionality.
add parallel for sortmerna
future to first line
add p path
add threads option