Remove .jy from script names
Remove any extension from script name
Configurable top links. See #12326
Remove unnecessary sanity checking of top_links attrs
Remove 'batch_search'. See #12347
Remove commented out code.
Populate the result table when rois are loaded.
test for conflict in import directory creation
provide sleep timer class for semaphore sharing
General clean up of test_ishare.py.
Initial cleanup of test1201.
Initial version of Hibernate filter disabling.

The different way in which iQuery is used allows for
calling resetReadFilter(), which should remove the owner
Hibernate filter. Sadly for now - it doesn't.
Use HibernateCallback instead of iQuery.

This change in methods that map Share Data to Sessions
allows for access to the Hibernate session object, which
allows for disabling read filters. This then returns shares
for both members and owners.
Further clean up test1201.
Enable tests that were failing (see #11537).
Move share data query to SqlAction.
Fix tests in test_ishare.py.

Those final changes make all tests in test_ishare.py
pass and make shares appear in the web client again.
Make sure query filter gets enabled.
Minor code cleanup.
replacing old icon for shares