BUG: Update SimpleFilters for Marksup Fiducials

ceb1a61 ENH: Update single Point and index types for Markups
4241d7b ENH: update the filter's seed list to use Markups nodes

From: Bradley Lowekamp <blowekamp@mail.nih.gov>

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22371 3bd1e089-480b-0410-8dfb-8563597acbee
STYLE: Refactor function onShowToolButtonTextToggled re-using existing code

See #2164

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22372 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: Apply "ShowToolButtonText" settings to mainwindows on restart

While the slot qSlicerSettingsStylesPanel::onShowToolButtonTextToggled()
is properly called when the settings is registered at startup, it failed
to disable/enable the toolButton property because the mainwindow is not
instantiated.

This commit ensure this is the case in the main windows readSettings()
function.

Fixes #2164

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22373 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Fix building of Slicer on MacOSX when cronjob is used

Extending PATH with /usr/sbin will allow the OpenSSL config script to
properly find 'sysctl' executable so that the configuration succeed.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22374 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Suggest "insteadof" git config only for ITKv3.

Since ITKv4 doesn't use submodule (see fab42d0ef) it only applies to ITKv3.

Fixes #2751

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22375 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Remove redundant option MRML_USE_Teem and only use MRML_USE_vtkTeem

Fixes #2571

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22376 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: In Recently loaded menu, rename "Clear Menu" into "Clear History"

See #1669

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22377 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: Increase maximum size for Recently loaded menu

See #1669

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22378 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: 3290. Fixed handling of ROIs and Annotation nodes in CLI modules. Added CLI_ROI_Test module.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22379 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: update MultiVolumeExplorer module

* BUG: fix 3058 - support relative change plotting
* BUG: fix static plotting
* STYLE: clean up the code a bit


git-svn-id: http://svn.slicer.org/Slicer4/trunk@22380 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Remove obsolete comment in module CMakeLists.txt

Following r22038, the comment "# Do not use 'project()'" doesn't make
sense anymore.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22381 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Change minimum supported MacOSX version from 10.4 to 10.5

The build system is now consistent with what is reported on
http://download.slicer.org

See #2025

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22382 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Explicitly require CMake >= 2.8.11.2 on Mountain Lion

See comment in the code for details.

Fixes #2025
Fixes #2022
See also #2957

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22383 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: fix the issues related to incorrect coloring of the static chart and incorrect baseline used for percent change visualization


git-svn-id: http://svn.slicer.org/Slicer4/trunk@22384 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: Adding three new layouts

Slice view only configurations added: 4x3, 4x2, 5x2.

See #2384

From: Andrey Fedorov <fedorov@bwh.harvard.edu>

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22385 3bd1e089-480b-0410-8dfb-8563597acbee
ENH: Associate icon with the new Slice view layouts

This is a follow-up of previous commit r22385

See #2384

From: Andrey Fedorov <fedorov@bwh.harvard.edu>

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22386 3bd1e089-480b-0410-8dfb-8563597acbee
COMP: Fix unused variable warning in qSlicerViewControllersModuleWidget

From: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com>

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22387 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: Remove DTI tutorial until pipeline for glyphing is fixed.

See r22363 [1], issue #3323 [2] and issue #2808 [3]

[1] http://viewvc.slicer.org/viewvc.cgi/Slicer4?view=revision&revision=22363
[2] http://www.na-mic.org/Bug/view.php?id=3323
[2] http://www.na-mic.org/Bug/view.php?id=2808

Co-authored-by: Chrystel Juan <chrystel.juan@kitware.com>

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22388 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: With "--launch" arg - Add symlink support / Do not show splashscreen

Fixes #2356
Fixes #3075

git-svn-id: http://svn.slicer.org/Slicer4/trunk@22389 3bd1e089-480b-0410-8dfb-8563597acbee
BUG: fix the issue where warning field is editable

If non populated, warning is initialized to '', allowing to set item flags.
The solution was discussed with @pieper. Closes issue 3284.


git-svn-id: http://svn.slicer.org/Slicer4/trunk@22390 3bd1e089-480b-0410-8dfb-8563597acbee