Merge pull request #569 from pwendell/merge-fixes.

Fixes bug where merges won't close associated pull request.

Previously we added "Closes #XX" in the title. Github will sometimes
linbreak the title in a way that causes this to not work. This patch
instead adds the line in the body.

This also makes the commit format more concise for merge commits.
We might consider just dropping those in the future.

Author: Patrick Wendell <pwendell@gmail.com>

Closes #569 and squashes the following commits:

732eba1 [Patrick Wendell] Fixes bug where merges won't close associated pull request.
Merge pull request #551 from qqsun8819/json-protocol.

[SPARK-1038] Add more fields in JsonProtocol and add tests that verify the JSON itself

This is a PR for SPARK-1038. Two major changes:
1 add some fields to JsonProtocol which is new and important to standalone-related data structures
2 Use Diff in liftweb.json to verity the stringified Json output for detecting someone mod type T to Option[T]

Author: qqsun8819 <jin.oyj@alibaba-inc.com>

Closes #551 and squashes the following commits:

fdf0b4e [qqsun8819] [SPARK-1038] 1. Change code style for more readable according to rxin review 2. change submitdate hard-coded string to a date object toString for more complexiblity
095a26f [qqsun8819] [SPARK-1038] mod according to  review of pwendel, use hard-coded json string for json data validation. Each test use its own json string
0524e41 [qqsun8819] Merge remote-tracking branch 'upstream/master' into json-protocol
d203d5c [qqsun8819] [SPARK-1038] Add more fields in JsonProtocol and add tests that verify the JSON itself
Merge pull request #566 from martinjaggi/copy-MLlib-d.

new MLlib documentation for optimization, regression and classification

new documentation with tex formulas, hopefully improving usability and reproducibility of the offered MLlib methods.
also did some minor changes in the code for consistency. scala tests pass.

this is the rebased branch, i deleted the old PR

jira:
https://spark-project.atlassian.net/browse/MLLIB-19

Author: Martin Jaggi <m.jaggi@gmail.com>

Closes #566 and squashes the following commits:

5f0f31e [Martin Jaggi] line wrap at 100 chars
4e094fb [Martin Jaggi] better description of GradientDescent
1d6965d [Martin Jaggi] remove broken url
ea569c3 [Martin Jaggi] telling what updater actually does
964732b [Martin Jaggi] lambda R() in documentation
a6c6228 [Martin Jaggi] better comments in SGD code for regression
b32224a [Martin Jaggi] new optimization documentation
d5dfef7 [Martin Jaggi] new classification and regression documentation
b07ead6 [Martin Jaggi] correct scaling for MSE loss
ba6158c [Martin Jaggi] use d for the number of features
bab2ed2 [Martin Jaggi] renaming LeastSquaresGradient
Merge pull request #567 from ScrapCodes/style2.

SPARK-1058, Fix Style Errors and Add Scala Style to Spark Build. Pt 2

Continuation of PR #557

With this all scala style errors are fixed across the code base !!

The reason for creating a separate PR was to not interrupt an already reviewed and ready to merge PR. Hope this gets reviewed soon and merged too.

Author: Prashant Sharma <prashant.s@imaginea.com>

Closes #567 and squashes the following commits:

3b1ec30 [Prashant Sharma] scala style fixes
Revert "Merge pull request #560 from pwendell/logging. Closes #560."

This reverts commit b6d40b782327188a25ded5b22790552121e5271f.