Cleaned up

Deleted unused plots and useless comments.
No longer binding type before splitting expression matrix
Fixed up dendrograms

colored labels etc...
Synched stems and lcls

in random selection, choose pair, not independently random
Heteroscedastic!

different ways of plotting variance to mean
Cleaned up

Deleted other tissue eQTL analysis and a few other things
Cleaned up even more

Made sections and deleted more non useful things.
Lots of changes