Merge pull request #56 from StreamComputing/asc

Asc
Documenting ocl_compiler.cpp
Documenting ocl_compiler.cpp (contrinued)
Documentation of ocl_compiler.cpp (continued)
Documented ocl_compiler
Merge pull request #59 from dkarkoulis/dk-dev

Dk dev
Added missing nbnxn_ocl_init_pairlist call

OpenCL non-local pair-list initialization on the GPU was missing.
Temporary fixes for ocl compiler
Fixed for ocl_compiler.cpp
Fix missing commit for ocl_compiler

Conflicts:
	src/gromacs/gmxlib/gpu_utils/ocl_compiler.cpp
Fixed ocl copy offset issue
Merge pull request #60 from StreamComputing/scdev

Scdev