We discussed that, but it's not the only cogent import... Not sure how to
handle it, but the whole plan is that everything in here will either go
away all together or be re-written. Open to suggestions on how to handle
the situation.


On Wed, May 14, 2014 at 1:43 PM, Daniel McDonald
<notifications@github.com>wrote:

> In brokit/denoiser.py:
>
> > +#!/usr/bin/env python
> > +
> > +"""
> > +This module provides pass-through access to PyCogent's denoiser code. It's a
> > +bit of a hack, but it allows us to remove the direct dependency on PyCogent by
> > +centralizing the denoiser code with all of the other PyCogent code that is
> > +targeted either for complete re-write or removal pending benchmarks. The basic
> > +idea is that it's not worth porting this code anywhere now because it's days are
> > +numbered, but we still need to be able to access it for the time being.
> > +
> > +May The Biological Research (application controller) Obsolescence Kit (brokit)
> > +be as short-lived as its name is awesome.
> > +
> > +"""
> > +
> > +from cogent.parse.flowgram import (
>
> Doesn't this force this module to be GPL?
>
> --
> Reply to this email directly or view it on GitHub<https://github.com/biocore/brokit/pull/25/files#r12660158>
> .
>