Resetting priorities to move pubs to top and impose alpha order for rest of tracks. refs #12362
Release log update
Encode release log update
Taking edwFinishAnalysis out of UTIL_DIRS if we're on a Mac because XCode doesn't come with -luuid;
it has to be obtained separately by using homebrew or macports etc.  Also, Jim confirms that Mac
users are extremely unlikely to need encodeDataWarehouse programs.
Oops, as Jonathan pointed out, VCF 4.0 can still have meta-information lines
without '='.  fixes #12417
Merge branch 'master' of hgwdev.cse.ucsc.edu:/data/git/kent
Putting settings for new combined phen+lit group down at assembly level - see note 11 refs #12362
ignore the noSplit arguments to make it become the default refs #11681
up to date repeat masker procedures, trf simple repeats and genscan refs #11681
Starting loading of QTL tracks for 3 farm animals refs #10954
Adding entry to make QTL track appear on chicken refs #10954
Release log update
Encode release log update
Fix for sometimes reporting no original paper link when really NCBI's page didn't serve up properly
code review corrections, refs #12418
adding other genomes found on the RR for completeness refs #10272
add url to animalQtl refs #10954
animalQtl reloading refs #10954
oops, Jim accidentally removed the -dir option.
Merge branch 'master' of hgwdev.cse.ucsc.edu:/data/git/kent