Added species tree building service and viewer. This is really really in dev mode.
Merge remote-tracking branch 'origin/master' into dev-species_trees
Read-only convenient tree visualization code (based on knhx.js) was
added.
Species tree construction and visualization works now for dev-workspace.
Widget for genome set building was added into microbial narrative.
Genome Set building widget is done.
Species tree widgets are ready in dev-aug_demo branch.
testing phenotype set
merging in master
adding rast genome import
Add Translate Model to New Genome Widget
Correction in proteome comparison widget for change of way of storing
genome references in proteome comparison object.
Monkeypatched the base RequestHandler to emit half-decent error pages instead of tracebacks.
Added an error reporting template.
adding import genome and pangenome analysis
Merge remote-tracking branch 'origin/dev-species_trees' into dev-aug_demo
Merge branch 'master' into dev-http_error
fixing phenotype namespace collision
compute panGenome method
Improved HTTP error handling.