Update bootstrap modules to new versions

xz, gettext-tools, cmake, m4, libtool, automake-1.13, and gnome-common
can all be simply updated to a newer version.
Add automake-1.14

It's a friend to automake-1.10, automake-1.11, automake-1.12, and
automake-1.13.
Update pkg-config

pkg-config 0.28 has a --with-internal-glib configure flag that also
avoids the circular dependency on glib, so there is no need to be stuck
at the old version.
Skip m4 on Tiger and later

Make good on the comment in bootstrap.modules that says you can skip
building m4 on new enough OSXs.
Fix outdated comments

We now don't skip bison and flex at all, so remove the comments saying we
do.
Update osx-bootstrap modules to newer versions

libpng, libjpeg, libxml2, and libxslt can all be simply updated to newer
versions.
Update libtiff

libtiff's newer version doesn't need the --without-apple-opengl-framework
configure switch, so delete that as well.
Update hicolor-icon-theme

Version 0.13 does support non-srcdir builds, so remove that flag.
Update gettext-runtime

This version doesn't need the patch for bug 33999 anymore, so we can
remove that patch file.
Add itstool

This is a quite common build dependency in Gnome lately.
Update gtk-doc, replace gnome-doc-utils with yelp

The latest gtk-doc needs itstool and libxml2, so it needs to go into
gtk-osx-bootstrap.modules.

The gnome-doc-utils module has been superseded by yelp-tools and
yelp-xsl.
Update comments on 10.10 versions of tools
Bug 739998 - berkeleydb build fails

Because nice eats the cd. Feed a leading ; to nice.
Update Ragel to 6.9

Ragel has a new web home as well.
Update freetype to 2.5.3 and split

Split freetype into two modules across all modulesets -- freetype
without harfbuzz, which is used to build harfbuzz, and the real freetype
which depends on harfbuzz and is used to build other packages.
Update harfbuzz and fontconfig

This also synchronizes their dependencies across modulesets. A harfbuzz
patch is now obsolete.
Synchronize meta-gtk-osx-freetype

This makes the requirements of meta-gtk-osx-freetype the same across all
modulesets.
Update libffi to 3.2.1

Libffi currently fails to build on master
(https://github.com/atgreen/libffi/issues/150). I recommend overriding
the tag in your .jhbuildrc-custom:

branches['libffi'] = (None, 'v3.2.1')

However, this isn't hardcoded into the modules file.
Update GLib to 2.42
Update pixman to 0.32

In addition, the --enable-openmp configure argument doesn't exist any
more, so there is no need to disable it.