Add Example code or writing Plate data to ome-tiff.
Expanded version to include multiple FOVS per well.
Errors found during review see https://github.com/openmicroscopy/bioformats/pull/1252/
Removed white space.
Standardise whitespace using BF rules.
Remove dead code, update comment.
Merge pull request #1 from bpindelski/pr-1252

Minor fixes.
Improve exception handling as suggested by bpindelski
Correct timebase for picoQuant .bin files.
Remove JDK 6 Library refs. Pass in filename as an arg & modify image name to use 1..n numbering.
Update release notes for 5.0.4
Update 5.0.4 date and add mention of PicoQuant support
Add missing dash
Update build script to correctly pass Sphinx options to Ant
Fix CLI tools when used from a source working copy

There is no longer a bio-formats.jar. We can use formats-gpl.jar
instead, which references the others in its manifest Class-Path.
Merge pull request #1313 from melissalinkert/rebased/develop/fix-cli-dev

Fix CLI tools when used from a source working copy (rebased onto develop)
Merge pull request #1312 from melissalinkert/rebased/develop/5.0.4-version-history

Update release notes for 5.0.4 (rebased onto develop)
Merge pull request #1304 from imunro/develop-INC_PQbin_tbase_correction

Correct timebase for picoQuant .bin files.
Fixed "SPW" in comment & removed automatic adding of "ome.tiff"
Merge pull request #1252 from imunro/develop-inc_SPWExample

Add Example code or writing Plate data to ome-tiff.