BS-10962 : As Bonita I need to improve the Tomcat and Jboss bundle

- Add comments for the conenctors in server.xml
- Move jaas-standard.cfg from bonita-home to the conf of tomcat
- In jaas-standard.cfg, rename BonitaAuth-1 in BonitaAuthentication-1
- For the conf of the database, put the conf for MySQL in the last