Working on issue #16
Added -f tag

Requires a sorted gff file of orfs. Currently tested by just copying some misassembly
Merge branch 'master' of github.com:jgluck/MetValidate
Added Orf Filtering

Access with -f command
Fixing errors due to formatting
Merge pull request #17 from jgluck/orf-filter

Orf Filtering Merged In, Various Bug Fixes