Added rho_eq.txt (rho in equilibrium) as a matrix in the DATA input files.
Added "check_dependencies" program to src which is used in generation of
the Makefile.
Modified the configuration file.
Tidied up most of the code and included more descriptions in the files.
Changed the way parameters are read in from the input file.

 Committer: Ryan McMillan <ryan@heliotrope.asg>