wrote acknowledgements
included flow chart from proposal
updated intro
included active zone image
changed source list to table
removed ipython notebooks part of the methods
intro to the methods
switched to iRefIndex
got rid of list of conversion options
wrote ocbio.extract section
fixed gold standard description
moved parallel processing bit
regenerated gene ontology term files
extrago table done
gene ontology appendix done
added fvector figure
removed numbers on subsubsections