Consider module depedencies when checking a preamble in libclang

Add module dependencies (header files, module map files) to the list of
files to check when deciding whether to rebuild a preamble. That fixes
using preambles with module imports so long as they are in
non-overridden files.

My intent is to use to unify the existing dependency collectors to the
new “DependencyCollectory” interface from this commit, starting with the
DependencyFileGenerator.