checkstyle
fix compilation error
remove patches made obsolete by bac6e7b124b5518c1c171babe603381b7afa89e5 a
Revert "Fixes various resource leak issues."

This reverts commit 30fc1ae089409c62c30443e6988287658f96f840.
I thought I removed these. I am going mad.
Much safer saveProfile routine
Tear down is filo, not fifo
Beauty. If array initialization can be beautiful.
Finish the log4j upgrade.
Static constants for true and false
Merge branch 'emma' of github.com:intermine/intermine into emma
Warnings and, more importantly, docs
fixed OS error where we were closing a connection someone else was using.
fixed OS error where we were closing a connection someone else was using.
compilation error. fix eclipse setup, getting mixed up with gradle
Fixed pathquery result helper test.
restore 30fc1ae089409c62c30443e6988287658f96f840
finish restoring 30fc1ae089409c62c30443e6988287658f96f840
Merge branch 'emma' of github.com:intermine/intermine into emma
Increasing test coverage... now at 98%Increasing test coverage... now at
98%Increasing test coverage... now at 98%Increasing test coverage... now
at 98%Increasing test coverage... now at 98%Increasing test coverage...
now at 98%Increasing test coverage... now at 98%Increasing test
coverage... now at 98%Increasing test coverage... now at 98%