Eclipse compatibility
Iterate version numbers to 1.1.0-alpha.5
Regress maven release plugin due to incompatibility with git
Iterate version numbers to 1.1.0-alpha.6
Merge branch 'develop' into feature/seqware-1968_pancancer_133

Conflicts:
	seqware-ext-testing/pom.xml
Add parallel test and failed attempt at SGE test