Major replumbing for version 0.1.1

- Creating convenience method Foundry.run(...) to bake in Dependency Injection.
- Switching up Foundry.Application#destructor() to work around JavaScript errors during destruction.
- Using Oxydizr as a front controller
- Refactoring Foundry.run to make it easier to use and version bump in Module.Manager.
- Updating module manager
- Foundry.pollyfill, and support for yepnope.js
- Updating readme to refer to github.io
- Final build for v0.1.1