fix: update for use in workflow and reflect new nipype conventions
fix: TOPUP naming and flexibility on extension overloading based on name
fix: more topup naming fixes
Merge branch 'master' into fix/eddy

* master:
  fix: moving save from numpy to pickle
  install ordereddict for py26
  fix: moving save from numpy to pickle
  install ordereddict for py26
  fix: update conda in environment
  fix: parenthesis fixes
  dbg: anaconda to miniconda update
  dbg: conda update
  fix: update conda
  ENH: Large SGE jobs were overloading on qstat
tst: updated tests
Fixed tracking specs
streamline outputs generation
mandatory cannot be false
Merge pull request #809 from chrisfilo/fix/mrtrix_prob_spec

Important bugfix for MRTrix tracking
Fixed bug in FSL DTIFit interface
Proper list conversion. Closes #811
Added tests
fix: updated apply topup
fix: arg generation
fix: topup workflow
tst: dummy files
Fix for stop argstr in MRtrix's Streamtrack interface
Updated test for DTIfit
Updated tests for streamtrack-derived interfaces
Merge pull request #812 from swederik/bf/dtifit

Fixed bug in FSL DTIFit interface