ran am, filtered some output in .gitignore
converted starter file to ss3sim standard
adapted control file to work with ss3sim
added R script to plot difference in am vs om
finished first draft of 2 sex model, needs to be simplified now
reran assessment model
removed extra fleets, changed F method
updated test code and created simple plot of difference in models
reran am with instant F (F_Method 2); also many incremental runs for the om