Update SettingUpDevelopmentEnvironment.md

After some wonderful help, I'm updating the setup with what I've learned and how we fixed my multiple build issues

I'm not familiar with the ML this page uses, so I've stuck the major points as bullets. I wanted to place them as subsections, but this works too.

It's pretty extensive but it works. I hope it'll help people get this working too.
Merge branch 'patch-2' of github.com:satrugha/waffle
Lots of updates to Setting up a Development Environment.
Fixed picture for running embedded Jetty.
FAQ: How can I prevent the browser from showing a login popup on failed authentication?
Fixed link.
Added an FAQ: does Waffle work on Linux?
Update FAQ.md
Update DoesWaffleWorkOnLinux.md
FAQ for using Waffle on the client side.
Updated FAQ to a local copy of whether Waffle can be used on the client side.
Upgraded to JNA 4.0.
Fix #58: error in InitializeSecurityContext: The buffers supplied to a function was too small.
Bump version 1.6.
Ignore Visual Studio generated files.
Upgraded to Wix 3.7.
Don't rely on error messages that vary with locale.
Maven central link instead of Sonatypes
Merge pull request #71 from kreyssel/master

Maven central link instead of Sonatypes
Add troubleshooting story on HTTP 1.0 protocol with .Net client

Full discussion on group https://groups.google.com/d/msg/waffle-users/Nisu-m19_nI/HLgaNhfBEw4J