Pulled specific changes from clean branch
Added case names to file outputs
Small typo corrections
Added method to calculate maximum partial correlation by varying time delay
Added .csv to .gitignore
Removed index limitations used during development
Merged selected changes from clean branch
Merge branch 'clean' into transientranking

Conflicts:
	looptest.py
	ranking/gaincalc.py
Added methods to plot transient importance
Modified file reading location to occur only once
Implemented fixed length in time series data vectors
Normalized data
Added threshold tests
Merge branch 'transientranking'

Conflicts:
	looptest.py
	ranking/formatmatrices.py

All conflicts resolved manually
Merge branch 'clean'
Changed file names to be conform to consistent policy
Changed filename to represent consistent policy
Removed duplicate function
Restricted demo to a single case for coverage analysis purposes
Added option to create network graphs