upper quartile normalization (pod and inputs)
plan updated
transcripts for sample chromosomes
Update README. Modify .gitignore
Add scripts for analysis "distribution_on_genic_elements"
Add scripts for analysis "genome_coverage"
Add scripts for analysis "genomic_distribution"
Add scripts for analysis "libraries_relative_read_density"
Add scripts for analysis "libraries_overlap_stats"
Rename bin/plan.txt -> TODO.md
Remove legacy scripts, analysis and data
Modify TODO.md
Create dist.ini for Dist::Zilla
Move test_data and testrun.sh in t/
Remove unnecessary files
Add script to import SAM to db. Add prereqs to dist.ini
Add scripts for db annotation with rmsk and transcripts
Update TODO.md
Add script for analysis "nmer_enrichment_over_shuffled"
Added annotate_db_sample_with_deletions.pl