Fix in re calculate FDR
Fix in eQTM effect direction and optimizations
Fix in file names
Fix in file names 2
fix in file names
fix in file names 2
QTL annotator
Updates to QTL annotator
Change read of GTF file
Removed duplicated LD-Calculator code
Fix in reading
Merge pull request #340 from Bonder-MJ/master

Addition of QTL file annotator, fixes and clean up of code